Survival-associated eQTLs across different cancer types
We identified 22,212 eQTLs associated with patient overall survival across different cancer types at FDR < 0.05.
Cancer type
|
SNP ID
|
SNP position (hg19)
|
Alleles (A/a)
|
log-rank test p-value
|
Sample size
|
Median survival time AA
|
Median survival time Aa
|
Median survival time aa
|
|
---|---|---|---|---|---|---|---|---|---|
KIRP | rs112019001 | chr15:24816025 | T/C | 8.63E-7 | 209 | 15.33 | 19.27 | 9.77 | KM Plot |
KIRP | rs11203064 | chr10:91077090 | G/A | 5.33E-8 | 207 | 16.48 | 16.93 | 6.92 | KM Plot |
KIRP | rs11203065 | chr10:91081946 | G/T | 3.1E-6 | 204 | 17 | 16.93 | 6.92 | KM Plot |
KIRP | rs112171060 | chr14:59858269 | A/G | 0.00024 | 209 | 14.68 | 19.4 | 6.63 | KM Plot |
KIRP | rs112236139 | chr14:59888884 | C/T | 0.000118 | 212 | 15.88 | 16.53 | 6.63 | KM Plot |
KIRP | rs112261101 | chr14:59917544 | T/G | 0.000115 | 212 | 16.43 | 17.03 | 6.63 | KM Plot |
KIRP | rs112289273 | chr15:24757362 | TCA/T | 7.05E-7 | 212 | 16.43 | 17.87 | 9.77 | KM Plot |
KIRP | rs112321255 | chr16:47607833 | A/AT | 7.92E-8 | 213 | 17.2 | 12.9 | 12.85 | KM Plot |
KIRP | rs112341626 | chr6:158573445 | G/C | 6.67E-6 | 203 | 13.03 | 24.6 | 10.55 | KM Plot |
KIRP | rs112347600 | chr19:6692045 | A/T | 0.000331 | 213 | 16.45 | 13.73 | 6.53 | KM Plot |
KIRP | rs112362098 | chr15:24777674 | T/C | 7.05E-7 | 212 | 16.43 | 17.87 | 9.77 | KM Plot |
KIRP | rs11242900 | chr6:4167863 | G/A | 8.27E-5 | 211 | 12.38 | 19.42 | 14.1 | KM Plot |
KIRP | rs112432737 | chr1:87677595 | A/G | 0.000217 | 212 | 14.83 | 26.2 | 9.25 | KM Plot |
KIRP | rs112460903 | chr15:24770140 | T/A | 7.05E-7 | 212 | 16.43 | 17.87 | 9.77 | KM Plot |
KIRP | rs11246379 | chr11:1009307 | C/T | 2.95E-8 | 213 | 14.87 | 19.92 | 10.6 | KM Plot |